Acanthofungus
Acanthofungus | |
Systematik | |
---|---|
Domän | Eukaryoter Eukaryota |
Rike | Svampar Fungi |
Division | Basidiesvampar Basidiomycota |
Klass | Agaricomycetes |
Ordning | Russulales |
Familj | Stereaceae |
Släkte | Acanthofungus |
Vetenskapligt namn | |
§ Acanthofungus |
Acanthofungus är ett släkte av svampar. Acanthofungus ingår i familjen Stereaceae, ordningen Russulales, klassen Agaricomycetes, divisionen basidiesvampar och riket svampar.[1]
Stereaceae |
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- ^ Bisby F.A., Roskov Y.R., Orrell T.M., Nicolson D., Paglinawan L.E., Bailly N., Kirk P.M., Bourgoin T., Baillargeon G., Ouvrard D. (red.) (7 februari 2011). ”Species 2000 & ITIS Catalogue of Life: 2011 Annual Checklist.”. Species 2000: Reading, UK. http://www.catalogueoflife.org/annual-checklist/2011/search/all/key/acanthofungus/match/1. Läst 24 september 2012.
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Molecular Phylogenetic analysis by Maximum Likelihood method (Acanthofungus rimosus and related taxa)
The evolutionary history was inferred by using the Maximum Likelihood method based on the Kimura 2-parameter model [1]. The tree with the highest log likelihood (-2718.2260) is shown. The percentage of trees in which the associated taxa clustered together is shown next to the branches. Initial tree(s) for the heuristic search were obtained by applying the Neighbor-Joining method to a matrix of pairwise distances estimated using the Maximum Composite Likelihood (MCL) approach. A discrete Gamma distribution was used to model evolutionary rate differences among sites (5 categories (+G, parameter = 0.5705)). The rate variation model allowed for some sites to be evolutionarily invariable ([+I], 60.8784% sites). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. The analysis involved 20 nucleotide sequences. There were a total of 934 positions in the final dataset. Evolutionary analyses were conducted in MEGA6 [6].
1. Kimura M. (1980). A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16:111-120.
2. Tamura K., Stecher G., Peterson D., Filipski A., and Kumar S. (2013). MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution30: 2725-2729.
- List with GenBank Sequences, which were used for the ML-Tree.
- Acanthobasidium norvegicum AY039328
- Acanthofungus rimosus AY039333
- Acanthophysium bisporum AY039318
- Acanthophysium cerussatum AY039310
- Acanthophysium lividocaeruleum AY039319
- Acanthophysium weirii AY039322
- Aleurobotrys botryosus AY039331
- Aleurodiscus abietis AY039324
- Aleurodiscus amorphus AY039312
- Aleurodiscus grantii AY039316
- Aleurodiscus mirabilis AY039332
- Aleurodiscus oakesii AY039313
- Gloeocystidiellum leucoxantha AF287860
- Gloeocystidiellum luridum AF506421
- Peniophora cinerea subsp. fagicola strain AF506424
- Stereum hirsutum AY039330
- Stereum reflexulum AF506480
- Stereum rugosum AY039311
- Stereum subtomentosum AF506482
- Xylobolus frustulatus AY039307